New Tools!

• Variant Search, aka "Marker Finder"

  Search for variants found at specified frequencies in your choice of haplogroups or lineages - originally developed as a "Marker Finder" but has many uses!

• Find Sequences for Any Haplogroup

  Retrieve haplogroup-specific GenBank sequences and their variants

• Variant Info {This tool is being re-worked. Please check back}

  Get info for specified variants - find haplogroup-specific frequencies for both variant and rCRS alleles

• PolG Pathogenicity Prediction Server

  A query interface by the Kaguni group to assess the pathogenicity of POLG mutations based on a mutation clustering model

Classic Tools

• MITOMASTER

  Haplotype your sequences and get variant information - including frequencies, conservation, references, and more. Input can be sequences in FASTA format, GenBank numbers, or SNVs. The SNV query is especially useful for novel variants.

• Allele Search

  Search for variants by position - a quick way to pull up info on general population variants and patient variants. For variants not currently listed in Mitomap, use the SNV query function in MITOMASTER, above.

• Sequences and variants in our current data set

  Retrieve sequence IDs from our current database, from GenBank, and elsewhere. Download a real-time listing of all variants found in Mitomap's set of GenBank sequences.

• Data download resources

  Download raw data from the Mitomap database.